Case Study: Linkage Map

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  • Floragenex executed SNP discovery and  genotyping of a biparental mapping population.
  • Using a low density scan, Floragenex identified over 400 novel SNPs that were subsequently genotyped using RAD sequencing in a doubled haploid population.
  • The genotypes and resulting genetic map were completely concordant with an integrated linkage map generated from the same population using EST-Unigene SNPs, DArT and SSR markers.

SNP Discovery and Genotyping: Linkage Map (download PDF)

Flowering Brassica Napus. Image by John Crellin via UK Floral Images.

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