Presentations and Posters by Floragenex

Presentations from 2011 RAD Symposium

“Sequenced RAD Markers: A SNP Discovery and Genotyping Platform”, Dr. Eric Johnson, ISHS Molecular Markers in Horticulture Symposium, July 29-August 1, 2009, Corvallis, Oregon. Presentation download

Publication of research using RAD technology

2011

Rowe, H. C., Renaut, S. and Guggisberg, A.

RAD in the realm of next-generation sequencing technologies

Molecular Ecology. doi: 10.1111/j.1365-294X.2011.05197.x  Link to Abstract

Barchi L, Lanteri S, Portis E, Acquadro A, Vale G, Toppino L, Rotino GL

Identification of SNP and SSR markers in eggplant using RAD tag sequencing

BMC Genomics 2011, 12:304 Link to Publication

Davey JW, Hohenlohe PA, Etter PD, Boone JQ, Catchen JM, Blaxter ML

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

Nature Reviews Genetics 12, 499-510. Link to Abstract

Pfender WF, Saha MC, Johnson EA, Slabaugh MB.

Mapping with RAD (restriction-site associated DNA) markers to rapidly identify QTL for stem rust resistance in Lolium perenne

Theor Appl Genet. 2011 Feb 23. Link to Abstract

Chutimanitsakun, Y., Nipper, R.W., Cuesta-Marcos, A., Cistue, L., Corey, A., Filichkina,T., Johnson,E.A.  and Hayes, P.M.

Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley

BMC Genomics 2011, 12:4 – Link to Publication

2010

Nipper, R.W., Atwood, T.S., Boone, J.Q., Gribbin, J.M. and Johnson, E.A. 2009.

SNP Discovery in zea mays using sequenced restriction-site associated DNA Markers

Acta Hort. (ISHS) 859:129-133 – Link to article

2008

Baird, N.A., P.D. Etter, T.S. Atwood, M.C. Currey, A.L. Shiver, Z.A. Lewis, E.U. Selker, W.A. Cresko and E.A. Johnson. 2008.

Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS ONE 3: e3376.

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Faculty of 1000 comment on Baird et al.

2007

Lewis, Z.A., A.L. Shiver, N. Stiffler, M.R. Miller, E.A. Johnson and E.U. Selker. 2007.

High-density detection of restriction-site-associated DNA markers for rapid mapping of mutated loci in Neurospora. Genetics 177: 1163-1171. 

Abstract link
Faculty of 1000 comment on Lewis et al.

Miller, M.R., T.S. Atwood, B.F. Eames, J.K. Eberhart, Y.L. Yan, J.H. Postlethwait and E.A. Johnson. 2007.

RAD marker microarrays enable rapid mapping of zebrafish mutations. Genome Biol 8: R105.

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Miller, M.R., J.P. Dunham, A. Amores, W.A. Cresko and E.A. Johnson. 2007.

Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Genome Res 17: 240-248.

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Faculty of 1000 comment on Miller et al.